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| AccordionDrawer.* |
| AccordionDrawer.AccordionDrawer | ||
public static final int |
BRUTEFORCE |
0 |
public static final int |
FROMFOCUSCELL |
1 |
public static final int |
X |
0 |
public static final int |
Y |
1 |
| AccordionDrawer.BinaryTree | ||
private static final int |
ACTION_GET |
0 |
private static final int |
ACTION_MAKE |
1 |
private static final int |
ACTION_PUT |
2 |
| AccordionDrawer.InteractionBox | ||
static final int |
X |
0 |
static final int |
Y |
1 |
| AccordionDrawer.Lens | ||
static final int |
X |
0 |
static final int |
Y |
1 |
| AccordionDrawer.QuadTree | ||
private static final int |
ACTION_GET |
0 |
private static final int |
ACTION_MAKE |
1 |
private static final int |
ACTION_PUT |
2 |
| BitmapFont.* |
| BitmapFont.BitmapFonts | ||
static final int |
maxAllowedHeight |
100 |
static final int |
maxAllowedWidth |
100 |
static final char |
maxChar |
127 |
static final char |
minChar |
32 |
| Parser.* |
| Parser.NewickConstants | ||
public static final int |
alpha |
13 |
public static final int |
both_char |
16 |
public static final int |
comment |
6 |
public static final int |
DEFAULT |
0 |
public static final int |
digit |
12 |
public static final int |
double_number |
22 |
public static final int |
EOF |
0 |
public static final int |
exponent |
21 |
public static final int |
number |
20 |
public static final int |
only_quote_char |
14 |
public static final int |
quoted_char |
19 |
public static final int |
quoted_string |
24 |
public static final int |
single_quote |
15 |
public static final int |
unquoted_char |
18 |
public static final int |
unquoted_string |
23 |
public static final int |
whitespace |
17 |
| Parser.SimpleCharStream | ||
public static final boolean |
staticFlag |
false |
| Parser.TokenMgrError | ||
static final int |
INVALID_LEXICAL_STATE |
2 |
static final int |
LEXICAL_ERROR |
0 |
static final int |
LOOP_DETECTED |
3 |
static final int |
STATIC_LEXER_ERROR |
1 |
| TreeJuxtaposer.* |
| TreeJuxtaposer.AccordionTreeDrawerFinal | ||
private static final int |
actionmodeDefault |
0 |
static final int |
ALL |
2 |
static final int |
DEVELOPER |
11 |
static final int |
HORIZ |
0 |
static final int |
MOUSEOVER |
0 |
static final int |
NODE |
0 |
static final int |
NONE |
12 |
static final int |
RECT_CREATE |
4 |
static final int |
RECT_FREEMOVE |
5 |
static final int |
RECT_FREEMOVEAGAIN |
6 |
static final int |
RECT_RESHAPE |
7 |
static final int |
ST_FREEMOVE |
1 |
static final int |
ST_FREEMOVEAGAIN |
2 |
static final int |
ST_RESHAPE |
3 |
static final int |
SUBTREE |
1 |
static final int |
VERT |
1 |
| TreeJuxtaposer.DebugFrame | ||
public static final int |
ACT_GROWDIR |
3 |
public static final int |
ACT_MODE |
1 |
public static final int |
ACT_SELECTION |
2 |
public static final int |
ACT_TYPE |
0 |
static final int |
B_TARGET |
2 |
public static final int |
BCN_SCORE |
6 |
static final int |
H_TARGET |
0 |
public static final int |
M_GROUP |
4 |
public static final int |
NAV_TYPE |
5 |
static final int |
NODE_TARGET |
3 |
static final int |
SUBTREE_TARGET |
4 |
static final int |
V_TARGET |
1 |
| TreeJuxtaposer.IncrementalSearch | ||
private static final boolean |
boldNonTerminalNodes |
true |
private static final boolean |
boldTerminalNodes |
false |
private static final int |
returnThreshold |
200 |
| TreeJuxtaposer.SettingsFrame | ||
private static final int |
DIM_MARK |
0 |
private static final int |
DIM_UNMARK |
1 |
private static final int |
LEFT_MASK |
0 |
private static final java.lang.String |
linkString |
"Linked Navigation" |
private static final int |
MAX_FONT |
1 |
private static final int |
MAX_FONT_INIT |
14 |
private static final int |
MAX_FONT_THRESHOLD |
50 |
private static final int |
MIN_FONT |
0 |
private static final int |
MIN_FONT_INIT |
14 |
private static final int |
MIN_FONT_THRESHOLD |
5 |
private static final int |
RIGHT_MASK |
2 |
private static final int |
SHOW_DIFF |
0 |
private static final int |
SHOW_LABEL |
1 |
private static final java.lang.String |
title |
"Settings" |
| TreeJuxtaposer.StateFrame | ||
private static final int |
A_CLEAR |
1 |
private static final int |
B_GROW |
0 |
private static final int |
B_MODE |
2 |
private static final int |
CANVAS_SIZE |
15 |
public static final int |
D_ACT |
5 |
public static final int |
F_ACT |
6 |
private static final int |
G_CLEAR |
0 |
public static final int |
GA_ACT |
0 |
public static final int |
GB_ACT |
1 |
public static final int |
GC_ACT |
2 |
public static final int |
GD_ACT |
3 |
private static final int |
H_MODE |
0 |
private static final java.lang.String |
LCA |
"LCA" |
public static final int |
LCA_ACT |
7 |
public static final int |
M_ACT |
4 |
private static final int |
N_RES |
0 |
private static final int |
S_GROW |
1 |
private static final int |
S_RES |
1 |
private static final java.lang.String |
title |
"Groups" |
private static final int |
V_MODE |
1 |
| TreeJuxtaposer.UI | ||
static final int |
ABOUTOPT |
0 |
static final int |
DEBUGOPT |
2 |
static final int |
DELETEOPT |
1 |
static final int |
DRAWBUTTERFLYOPT |
4 |
static final int |
FILEMENU |
0 |
static final int |
FINDMENU |
1 |
static final int |
FINDOPT |
0 |
static final int |
GROUPOPT |
0 |
static final int |
HELPMENU |
3 |
static final int |
MENUFONTSIZE |
10 |
static final int |
MENUFONTSTYLE |
1 |
static final java.lang.String |
MENUFONTTYPE |
"Helvetica" |
static final int |
OPENOPT |
0 |
static final int |
QUITOPT |
3 |
static final int |
SETTINGOPT |
1 |
static final int |
TOOLMENU |
2 |
| TreeJuxtaposer.Utils | ||
public static final java.lang.String |
newick |
"nh" |
public static final java.lang.String |
newick_file_description |
"newick file ( .nh )" |
public static final java.lang.String |
nexus |
"nexus" |
public static final java.lang.String |
nexus_file_description |
"nexus file ( .nexus )" |
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